J7_7ZQ5_002

3D structure

PDB id

7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG

Length

36 nucleotides

Bulged bases

7ZQ5|1|b|A|945

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZQ5|1|b|C|817
7ZQ5|1|b|G|818
7ZQ5|1|b|A|819
7ZQ5|1|b|A|820
7ZQ5|1|b|A|821
7ZQ5|1|b|G|822
*
7ZQ5|1|b|C|835
7ZQ5|1|b|G|836
7ZQ5|1|b|C|837
7ZQ5|1|b|C|838
*
7ZQ5|1|b|G|940
7ZQ5|1|b|A|941
7ZQ5|1|b|G|942
7ZQ5|1|b|A|943
7ZQ5|1|b|C|944
7ZQ5|1|b|A|945
7ZQ5|1|b|C|946
*
7ZQ5|1|b|G|971
7ZQ5|1|b|A|972
7ZQ5|1|b|A|973
7ZQ5|1|b|G|974
7ZQ5|1|b|A|975
7ZQ5|1|b|G|976
*
7ZQ5|1|b|C|987
7ZQ5|1|b|A|988
7ZQ5|1|b|G|989
7ZQ5|1|b|A|990
7ZQ5|1|b|C|991
*
7ZQ5|1|b|G|1163
7ZQ5|1|b|C|1164
*
7ZQ5|1|b|G|1185
7ZQ5|1|b|G|1186
7ZQ5|1|b|G|1187
7ZQ5|1|b|U|1188
7ZQ5|1|b|A|1189
7ZQ5|1|b|G|1190

Current chains

Chain b

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L30

Chain 7

50S ribosomal protein L35

Chain a

5S ribosomal RNA; 5S rRNA

Chain l

50S ribosomal protein L15

Chain q

50S ribosomal protein L20

Chain r

50S ribosomal protein L21