3D structure

PDB id
7ZQ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain
Experimental method
ELECTRON MICROSCOPY
Resolution
2.75 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
7ZQ6|1|b|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ZQ6|1|b|C|8
7ZQ6|1|b|G|9
7ZQ6|1|b|A|10
7ZQ6|1|b|C|11
7ZQ6|1|b|U|12
7ZQ6|1|b|A|13
7ZQ6|1|b|A|14
7ZQ6|1|b|G|15
*
7ZQ6|1|b|U|525
7ZQ6|1|b|A|526
7ZQ6|1|b|C|527
7ZQ6|1|b|A|528
7ZQ6|1|b|A|529
7ZQ6|1|b|G|530
7ZQ6|1|b|C|531
*
7ZQ6|1|b|G|2018
7ZQ6|1|b|A|2019
7ZQ6|1|b|A|2020
7ZQ6|1|b|C|2021
7ZQ6|1|b|U|2022
7ZQ6|1|b|C|2023
*
7ZQ6|1|b|G|2040
7ZQ6|1|b|U|2041
7ZQ6|1|b|A|2042
7ZQ6|1|b|C|2043
*
7ZQ6|1|b|G|2625
7ZQ6|1|b|C|2626
7ZQ6|1|b|G|2627
7ZQ6|1|b|C|2628
7ZQ6|1|b|U|2629
7ZQ6|1|b|G|2630
*
7ZQ6|1|b|C|2788
7ZQ6|1|b|C|2789
*
7ZQ6|1|b|G|2894
7ZQ6|1|b|G|2895

Current chains

Chain b
23S rRNA

Nearby chains

Chain 3
50S ribosomal protein L32
Chain d
50S ribosomal protein L3
Chain j
50S ribosomal protein L13
Chain q
50S ribosomal protein L20
Chain s
50S ribosomal protein L22

Coloring options:

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