3D structure

PDB id
7ZTA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
7ZTA|1|23S1|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ZTA|1|23S1|C|8
7ZTA|1|23S1|G|9
7ZTA|1|23S1|A|10
7ZTA|1|23S1|C|11
7ZTA|1|23S1|U|12
7ZTA|1|23S1|A|13
7ZTA|1|23S1|A|14
7ZTA|1|23S1|G|15
*
7ZTA|1|23S1|U|525
7ZTA|1|23S1|A|526
7ZTA|1|23S1|C|527
7ZTA|1|23S1|A|528
7ZTA|1|23S1|A|529
7ZTA|1|23S1|G|530
7ZTA|1|23S1|C|531
*
7ZTA|1|23S1|G|2018
7ZTA|1|23S1|A|2019
7ZTA|1|23S1|A|2020
7ZTA|1|23S1|C|2021
7ZTA|1|23S1|U|2022
7ZTA|1|23S1|C|2023
*
7ZTA|1|23S1|G|2040
7ZTA|1|23S1|U|2041
7ZTA|1|23S1|A|2042
7ZTA|1|23S1|C|2043
*
7ZTA|1|23S1|G|2625
7ZTA|1|23S1|C|2626
7ZTA|1|23S1|G|2627
7ZTA|1|23S1|C|2628
7ZTA|1|23S1|U|2629
7ZTA|1|23S1|G|2630
*
7ZTA|1|23S1|C|2788
7ZTA|1|23S1|C|2789
*
7ZTA|1|23S1|G|2894
7ZTA|1|23S1|G|2895

Current chains

Chain 23S1
23S ribosomal RNA

Nearby chains

Chain L031
50S ribosomal protein L3
Chain L131
50S ribosomal protein L13
Chain L201
50S ribosomal protein L20
Chain L211
50S ribosomal protein L21
Chain L221
50S ribosomal protein L22
Chain L321
50S ribosomal protein L32

Coloring options:

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