3D structure

PDB id
7ZTA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
7ZTA|1|23S1|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ZTA|1|23S1|C|817
7ZTA|1|23S1|G|818
7ZTA|1|23S1|A|819
7ZTA|1|23S1|A|820
7ZTA|1|23S1|A|821
7ZTA|1|23S1|G|822
*
7ZTA|1|23S1|C|835
7ZTA|1|23S1|G|836
7ZTA|1|23S1|C|837
7ZTA|1|23S1|C|838
*
7ZTA|1|23S1|G|940
7ZTA|1|23S1|A|941
7ZTA|1|23S1|G|942
7ZTA|1|23S1|A|943
7ZTA|1|23S1|C|944
7ZTA|1|23S1|A|945
7ZTA|1|23S1|C|946
*
7ZTA|1|23S1|G|971
7ZTA|1|23S1|A|972
7ZTA|1|23S1|A|973
7ZTA|1|23S1|G|974
7ZTA|1|23S1|A|975
7ZTA|1|23S1|G|976
*
7ZTA|1|23S1|C|987
7ZTA|1|23S1|A|988
7ZTA|1|23S1|G|989
7ZTA|1|23S1|A|990
7ZTA|1|23S1|C|991
*
7ZTA|1|23S1|G|1163
7ZTA|1|23S1|C|1164
*
7ZTA|1|23S1|G|1185
7ZTA|1|23S1|G|1186
7ZTA|1|23S1|G|1187
7ZTA|1|23S1|U|1188
7ZTA|1|23S1|A|1189
7ZTA|1|23S1|G|1190

Current chains

Chain 23S1
23S ribosomal RNA

Nearby chains

Chain 05S1
5S ribosomal RNA; 5S rRNA
Chain L151
50S ribosomal protein L15
Chain L201
50S ribosomal protein L20
Chain L211
50S ribosomal protein L21
Chain L301
50S ribosomal protein L30
Chain L351
50S ribosomal protein L35

Coloring options:

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