3D structure

PDB id
7ZUW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
4.3 Å

Loop

Sequence
CGAAGU*AG*UGGG*CGAUGC*GAACG*CC*GAGUAG
Length
31 nucleotides
Bulged bases
7ZUW|1|5|G|1117
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ZUW|1|5|C|950
7ZUW|1|5|G|951
7ZUW|1|5|A|952
7ZUW|1|5|A|953
7ZUW|1|5|G|954
7ZUW|1|5|U|955
*
7ZUW|1|5|A|968
7ZUW|1|5|G|969
*
7ZUW|1|5|U|1115
7ZUW|1|5|G|1116
7ZUW|1|5|G|1117
7ZUW|1|5|G|1118
*
7ZUW|1|5|C|1142
7ZUW|1|5|G|1143
7ZUW|1|5|A|1144
7ZUW|1|5|U|1145
7ZUW|1|5|G|1146
7ZUW|1|5|C|1147
*
7ZUW|1|5|G|1158
7ZUW|1|5|A|1159
7ZUW|1|5|A|1160
7ZUW|1|5|C|1161
7ZUW|1|5|G|1162
*
7ZUW|1|5|C|1339
7ZUW|1|5|C|1340
*
7ZUW|1|5|G|1366
7ZUW|1|5|A|1367
7ZUW|1|5|G|1368
7ZUW|1|5|U|1369
7ZUW|1|5|A|1370
7ZUW|1|5|G|1371

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain 4
5S ribosomal RNA; 5S rRNA
Chain BC
RPL4A isoform 1
Chain BF
60S ribosomal protein L7-A
Chain BK
60S ribosomal protein L13-A
Chain BP
60S ribosomal protein L18-A
Chain BS
60S ribosomal protein L21-A
Chain BZ
60S ribosomal protein L28
Chain Ba
60S ribosomal protein L29
Chain Bd
RPL32 isoform 1
Chain Be
60S ribosomal protein L33-A

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1572 s