J7_8B0X_001

3D structure

PDB id

8B0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 70S ribosome in the unrotated state (P and E, tRNAs)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.55 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

8B0X|1|a|C|2025

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8B0X|1|a|C|8
8B0X|1|a|G|9
8B0X|1|a|A|10
8B0X|1|a|C|11
8B0X|1|a|U|12
8B0X|1|a|A|13
8B0X|1|a|A|14
8B0X|1|a|G|15
*
8B0X|1|a|U|525
8B0X|1|a|A|526
8B0X|1|a|C|527
8B0X|1|a|A|528
8B0X|1|a|A|529
8B0X|1|a|G|530
8B0X|1|a|C|531
*
8B0X|1|a|G|2022
8B0X|1|a|A|2023
8B0X|1|a|A|2024
8B0X|1|a|C|2025
8B0X|1|a|U|2026
8B0X|1|a|C|2027
*
8B0X|1|a|G|2044
8B0X|1|a|U|2045
8B0X|1|a|A|2046
8B0X|1|a|C|2047
*
8B0X|1|a|G|2629
8B0X|1|a|C|2630
8B0X|1|a|G|2631
8B0X|1|a|C|2632
8B0X|1|a|U|2633
8B0X|1|a|G|2634
*
8B0X|1|a|C|2792
8B0X|1|a|C|2793
*
8B0X|1|a|G|2898
8B0X|1|a|G|2899

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

50S ribosomal protein L3

Chain i

50S ribosomal protein L13

Chain p

50S ribosomal protein L20

Chain r

50S ribosomal protein L22

Chain z

50S ribosomal protein L32