3D structure

PDB id
8B0X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Translating 70S ribosome in the unrotated state (P and E, tRNAs)
Experimental method
ELECTRON MICROSCOPY
Resolution
1.55 Å

Loop

Sequence
CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
33 nucleotides
Bulged bases
8B0X|1|a|A|947
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8B0X|1|a|C|819
8B0X|1|a|G|820
8B0X|1|a|A|821
8B0X|1|a|A|822
8B0X|1|a|A|823
8B0X|1|a|G|824
*
8B0X|1|a|C|837
8B0X|1|a|G|838
8B0X|1|a|C|839
*
8B0X|1|a|G|944
8B0X|1|a|A|945
8B0X|1|a|C|946
8B0X|1|a|A|947
8B0X|1|a|C|948
*
8B0X|1|a|G|973
8B0X|1|a|A|974
8B0X|1|a|A|975
8B0X|1|a|G|976
8B0X|1|a|A|977
8B0X|1|a|G|978
*
8B0X|1|a|C|989
8B0X|1|a|A|990
8B0X|1|a|G|991
8B0X|1|a|A|992
8B0X|1|a|C|993
*
8B0X|1|a|G|1165
8B0X|1|a|C|1166
*
8B0X|1|a|G|1187
8B0X|1|a|G|1188
8B0X|1|a|G|1189
8B0X|1|a|U|1190
8B0X|1|a|A|1191
8B0X|1|a|G|1192

Current chains

Chain a
23S rRNA

Nearby chains

Chain 2
50S ribosomal protein L35
Chain b
5S ribosomal RNA; 5S rRNA
Chain k
50S ribosomal protein L15
Chain p
50S ribosomal protein L20
Chain q
50S ribosomal protein L21
Chain y
50S ribosomal protein L30

Coloring options:

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