J7_8BR8_001
3D structure
- PDB id
- 8BR8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Giardia ribosome in POST-T state (A1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.35 Å
Loop
- Sequence
- CGAAAU*AG*UGGG*CGAGGC*GGACG*CC*GGGUAG
- Length
- 31 nucleotides
- Bulged bases
- 8BR8|1|Lt|G|826
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8BR8|1|Lt|C|666
8BR8|1|Lt|G|667
8BR8|1|Lt|A|668
8BR8|1|Lt|A|669
8BR8|1|Lt|A|670
8BR8|1|Lt|U|671
*
8BR8|1|Lt|A|684
8BR8|1|Lt|G|685
*
8BR8|1|Lt|U|824
8BR8|1|Lt|G|825
8BR8|1|Lt|G|826
8BR8|1|Lt|G|827
*
8BR8|1|Lt|C|851
8BR8|1|Lt|G|852
8BR8|1|Lt|A|853
8BR8|1|Lt|G|854
8BR8|1|Lt|G|855
8BR8|1|Lt|C|856
*
8BR8|1|Lt|G|867
8BR8|1|Lt|G|868
8BR8|1|Lt|A|869
8BR8|1|Lt|C|870
8BR8|1|Lt|G|871
*
8BR8|1|Lt|C|1038
8BR8|1|Lt|C|1039
*
8BR8|1|Lt|G|1052
8BR8|1|Lt|G|1053
8BR8|1|Lt|G|1054
8BR8|1|Lt|U|1055
8BR8|1|Lt|A|1056
8BR8|1|Lt|G|1057
Current chains
- Chain Lt
- Large Subunit rRNA
Nearby chains
- Chain LC
- Ribosomal protein L4
- Chain LE
- 5S ribosomal RNA; 5S rRNA
- Chain LH
- Ribosomal protein L7
- Chain LM
- 60S ribosomal protein L13
- Chain LR
- Ribosomal protein L18
- Chain LU
- Ribosomal protein L21
- Chain Lb
- Ribosomal protein L27a
- Chain Lc
- 60S ribosomal protein L29
- Chain Lf
- Ribosomal protein L32
- Chain Lg
- Ribosomal protein L35a
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