J7_8C3A_001
3D structure
- PDB id
- 8C3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CGAUGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 8C3A|1|1|G|1112
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8C3A|1|1|C|945
8C3A|1|1|G|946
8C3A|1|1|A|947
8C3A|1|1|A|948
8C3A|1|1|G|949
8C3A|1|1|U|950
*
8C3A|1|1|A|963
8C3A|1|1|G|964
*
8C3A|1|1|U|1110
8C3A|1|1|G|1111
8C3A|1|1|G|1112
8C3A|1|1|G|1113
*
8C3A|1|1|C|1137
8C3A|1|1|G|1138
8C3A|1|1|A|1139
8C3A|1|1|U|1140
8C3A|1|1|G|1141
8C3A|1|1|C|1142
*
8C3A|1|1|G|1153
8C3A|1|1|A|1154
8C3A|1|1|A|1155
8C3A|1|1|C|1156
8C3A|1|1|G|1157
*
8C3A|1|1|C|1334
8C3A|1|1|C|1335
*
8C3A|1|1|G|1361
8C3A|1|1|A|1362
8C3A|1|1|G|1363
8C3A|1|1|U|1364
8C3A|1|1|A|1365
8C3A|1|1|G|1366
Current chains
- Chain 1
- 25S
Nearby chains
- Chain 2
- 60S ribosomal protein L21-A
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain AB
- 60S ribosomal protein L28
- Chain AC
- 60S ribosomal protein L29
- Chain AF
- 60S ribosomal protein L32
- Chain AG
- 60S ribosomal protein L33-A
- Chain l
- 60S ribosomal protein L4-B
- Chain o
- 60S ribosomal protein L7-A
- Chain t
- 60S ribosomal protein L13
- Chain y
- 60S ribosomal protein L18-A
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