J7_8FRU_001
3D structure
- PDB id
- 8FRU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S subunit of the Giardia lamblia 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- CGAAAU*AG*UGGG*CGAGGC*GGACG*CC*GGGUAG
- Length
- 31 nucleotides
- Bulged bases
- 8FRU|1|1|G|824
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FRU|1|1|C|664
8FRU|1|1|G|665
8FRU|1|1|A|666
8FRU|1|1|A|667
8FRU|1|1|A|668
8FRU|1|1|U|669
*
8FRU|1|1|A|682
8FRU|1|1|G|683
*
8FRU|1|1|U|822
8FRU|1|1|G|823
8FRU|1|1|G|824
8FRU|1|1|G|825
*
8FRU|1|1|C|849
8FRU|1|1|G|850
8FRU|1|1|A|851
8FRU|1|1|G|852
8FRU|1|1|G|853
8FRU|1|1|C|854
*
8FRU|1|1|G|865
8FRU|1|1|G|866
8FRU|1|1|A|867
8FRU|1|1|C|868
8FRU|1|1|G|869
*
8FRU|1|1|C|1036
8FRU|1|1|C|1037
*
8FRU|1|1|G|1050
8FRU|1|1|G|1051
8FRU|1|1|G|1052
8FRU|1|1|U|1053
8FRU|1|1|A|1054
8FRU|1|1|G|1055
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain C
- 60S ribosomal protein uL4
- Chain F
- 60S ribosomal protein uL30
- Chain L
- 60S ribosomal protein eL13
- Chain Q
- 60S ribosomal protein eL18
- Chain T
- 60S ribosomal protein eL21
- Chain a
- 60S ribosomal protein uL15
- Chain b
- 60S ribosomal protein eL29
- Chain e
- 60S ribosomal protein eL32
- Chain f
- 60S ribosomal protein eL33
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