3D structure

PDB id
8G2U (explore in PDB, NAKB, or RNA 3D Hub)
Description
Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
8G2U|1|B|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8G2U|1|B|C|817
8G2U|1|B|G|818
8G2U|1|B|A|819
8G2U|1|B|A|820
8G2U|1|B|A|821
8G2U|1|B|G|822
*
8G2U|1|B|C|835
8G2U|1|B|G|836
8G2U|1|B|C|837
8G2U|1|B|C|838
*
8G2U|1|B|G|940
8G2U|1|B|A|941
8G2U|1|B|G|942
8G2U|1|B|A|943
8G2U|1|B|C|944
8G2U|1|B|A|945
8G2U|1|B|C|946
*
8G2U|1|B|G|971
8G2U|1|B|A|972
8G2U|1|B|A|973
8G2U|1|B|G|974
8G2U|1|B|A|975
8G2U|1|B|G|976
*
8G2U|1|B|C|987
8G2U|1|B|A|988
8G2U|1|B|G|989
8G2U|1|B|A|990
8G2U|1|B|C|991
*
8G2U|1|B|G|1163
8G2U|1|B|C|1164
*
8G2U|1|B|G|1185
8G2U|1|B|G|1186
8G2U|1|B|G|1187
8G2U|1|B|U|1188
8G2U|1|B|A|1189
8G2U|1|B|G|1190

Current chains

Chain B
23S rRNA

Nearby chains

Chain 3
50S ribosomal protein L35
Chain A
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
Ribosomal protein L21
Chain Z
50S ribosomal protein L30

Coloring options:

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