3D structure

PDB id
8G31 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
8G31|1|B|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8G31|1|B|C|8
8G31|1|B|G|9
8G31|1|B|A|10
8G31|1|B|C|11
8G31|1|B|U|12
8G31|1|B|A|13
8G31|1|B|A|14
8G31|1|B|G|15
*
8G31|1|B|U|525
8G31|1|B|A|526
8G31|1|B|C|527
8G31|1|B|A|528
8G31|1|B|A|529
8G31|1|B|G|530
8G31|1|B|C|531
*
8G31|1|B|G|2018
8G31|1|B|A|2019
8G31|1|B|A|2020
8G31|1|B|C|2021
8G31|1|B|U|2022
8G31|1|B|C|2023
*
8G31|1|B|G|2040
8G31|1|B|U|2041
8G31|1|B|A|2042
8G31|1|B|C|2043
*
8G31|1|B|G|2625
8G31|1|B|C|2626
8G31|1|B|G|2627
8G31|1|B|C|2628
8G31|1|B|U|2629
8G31|1|B|G|2630
*
8G31|1|B|C|2788
8G31|1|B|C|2789
*
8G31|1|B|G|2894
8G31|1|B|G|2895

Current chains

Chain B
23S

Nearby chains

Chain 0
50S ribosomal protein L32
Chain D
50S ribosomal protein L3
Chain J
50S ribosomal protein L13
Chain Q
50S ribosomal protein L20
Chain R
Ribosomal protein L21
Chain S
50S ribosomal protein L22

Coloring options:

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