3D structure

PDB id
8G31 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
8G31|1|B|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8G31|1|B|C|817
8G31|1|B|G|818
8G31|1|B|A|819
8G31|1|B|A|820
8G31|1|B|A|821
8G31|1|B|G|822
*
8G31|1|B|C|835
8G31|1|B|G|836
8G31|1|B|C|837
8G31|1|B|C|838
*
8G31|1|B|G|940
8G31|1|B|A|941
8G31|1|B|G|942
8G31|1|B|A|943
8G31|1|B|C|944
8G31|1|B|A|945
8G31|1|B|C|946
*
8G31|1|B|G|971
8G31|1|B|A|972
8G31|1|B|A|973
8G31|1|B|G|974
8G31|1|B|A|975
8G31|1|B|G|976
*
8G31|1|B|C|987
8G31|1|B|A|988
8G31|1|B|G|989
8G31|1|B|A|990
8G31|1|B|C|991
*
8G31|1|B|G|1163
8G31|1|B|C|1164
*
8G31|1|B|G|1185
8G31|1|B|G|1186
8G31|1|B|G|1187
8G31|1|B|U|1188
8G31|1|B|A|1189
8G31|1|B|G|1190

Current chains

Chain B
23S

Nearby chains

Chain 3
50S ribosomal protein L35
Chain A
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
Ribosomal protein L21
Chain Z
50S ribosomal protein L30

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1562 s