J7_8IP8_001
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CGAUGC*GGAAG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 8IP8|1|RB|G|1119
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8IP8|1|RB|C|952
8IP8|1|RB|G|953
8IP8|1|RB|A|954
8IP8|1|RB|A|955
8IP8|1|RB|G|956
8IP8|1|RB|U|957
*
8IP8|1|RB|A|970
8IP8|1|RB|G|971
*
8IP8|1|RB|U|1117
8IP8|1|RB|G|1118
8IP8|1|RB|G|1119
8IP8|1|RB|G|1120
*
8IP8|1|RB|C|1144
8IP8|1|RB|G|1145
8IP8|1|RB|A|1146
8IP8|1|RB|U|1147
8IP8|1|RB|G|1148
8IP8|1|RB|C|1149
*
8IP8|1|RB|G|1160
8IP8|1|RB|G|1161
8IP8|1|RB|A|1162
8IP8|1|RB|A|1163
8IP8|1|RB|G|1164
*
8IP8|1|RB|C|1342
8IP8|1|RB|C|1343
*
8IP8|1|RB|G|1369
8IP8|1|RB|A|1370
8IP8|1|RB|G|1371
8IP8|1|RB|U|1372
8IP8|1|RB|A|1373
8IP8|1|RB|G|1374
Current chains
- Chain RB
- 60S ribosomal RNA
Nearby chains
- Chain BA
- 60S ribosomal protein eL21
- Chain CB
- 60S ribosomal protein uL30
- Chain IA
- 60S ribosomal protein uL15
- Chain JA
- 60S ribosomal protein eL18
- Chain KB
- 60S ribosomal protein eL13
- Chain MB
- 60S ribosomal protein eL33
- Chain OB
- 60S ribosomal protein eL29
- Chain QA
- 60S ribosomal protein eL28
- Chain TA
- 60S ribosomal protein eL32
- Chain TB
- 5S ribosomal RNA; 5S rRNA
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