J7_8PKL_002
3D structure
- PDB id
- 8PKL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.09 Å
Loop
- Sequence
- CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
- Length
- 36 nucleotides
- Bulged bases
- 8PKL|1|7|A|945
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8PKL|1|7|C|817
8PKL|1|7|G|818
8PKL|1|7|A|819
8PKL|1|7|A|820
8PKL|1|7|A|821
8PKL|1|7|G|822
*
8PKL|1|7|C|835
8PKL|1|7|G|836
8PKL|1|7|C|837
8PKL|1|7|C|838
*
8PKL|1|7|G|940
8PKL|1|7|A|941
8PKL|1|7|G|942
8PKL|1|7|A|943
8PKL|1|7|C|944
8PKL|1|7|A|945
8PKL|1|7|C|946
*
8PKL|1|7|G|971
8PKL|1|7|A|972
8PKL|1|7|A|973
8PKL|1|7|G|974
8PKL|1|7|A|975
8PKL|1|7|G|976
*
8PKL|1|7|C|987
8PKL|1|7|A|988
8PKL|1|7|G|989
8PKL|1|7|A|990
8PKL|1|7|C|991
*
8PKL|1|7|G|1163
8PKL|1|7|C|1164
*
8PKL|1|7|G|1185
8PKL|1|7|G|1186
8PKL|1|7|G|1187
8PKL|1|7|U|1188
8PKL|1|7|A|1189
8PKL|1|7|G|1190
Current chains
- Chain 7
- 23S ribosomal RNA
Nearby chains
- Chain 3
- 50S ribosomal protein L30
- Chain 6
- 50S ribosomal protein L35
- Chain 8
- 5S ribosomal RNA; 5S rRNA
- Chain o
- 50S ribosomal protein L15
- Chain t
- 50S ribosomal protein L20
- Chain u
- 50S ribosomal protein L21
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