3D structure

PDB id
8UZ3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
8UZ3|1|1|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UZ3|1|1|C|8
8UZ3|1|1|G|9
8UZ3|1|1|A|10
8UZ3|1|1|C|11
8UZ3|1|1|U|12
8UZ3|1|1|A|13
8UZ3|1|1|A|14
8UZ3|1|1|G|15
*
8UZ3|1|1|U|525
8UZ3|1|1|A|526
8UZ3|1|1|C|527
8UZ3|1|1|A|528
8UZ3|1|1|A|529
8UZ3|1|1|G|530
8UZ3|1|1|C|531
*
8UZ3|1|1|G|2018
8UZ3|1|1|A|2019
8UZ3|1|1|A|2020
8UZ3|1|1|C|2021
8UZ3|1|1|U|2022
8UZ3|1|1|C|2023
*
8UZ3|1|1|G|2040
8UZ3|1|1|U|2041
8UZ3|1|1|A|2042
8UZ3|1|1|C|2043
*
8UZ3|1|1|G|2625
8UZ3|1|1|C|2626
8UZ3|1|1|G|2627
8UZ3|1|1|C|2628
8UZ3|1|1|U|2629
8UZ3|1|1|G|2630
*
8UZ3|1|1|C|2788
8UZ3|1|1|C|2789
*
8UZ3|1|1|G|2894
8UZ3|1|1|G|2895

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L3
Chain J
50S ribosomal protein L13
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain S
50S ribosomal protein L22
Chain b
50S ribosomal protein L32

Coloring options:

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