3D structure

PDB id
8UZ3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
33 nucleotides
Bulged bases
8UZ3|1|1|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UZ3|1|1|C|817
8UZ3|1|1|G|818
8UZ3|1|1|A|819
8UZ3|1|1|A|820
8UZ3|1|1|A|821
8UZ3|1|1|G|822
*
8UZ3|1|1|C|835
8UZ3|1|1|G|836
8UZ3|1|1|C|837
*
8UZ3|1|1|G|942
8UZ3|1|1|A|943
8UZ3|1|1|C|944
8UZ3|1|1|A|945
8UZ3|1|1|C|946
*
8UZ3|1|1|G|971
8UZ3|1|1|A|972
8UZ3|1|1|A|973
8UZ3|1|1|G|974
8UZ3|1|1|A|975
8UZ3|1|1|G|976
*
8UZ3|1|1|C|987
8UZ3|1|1|A|988
8UZ3|1|1|G|989
8UZ3|1|1|A|990
8UZ3|1|1|C|991
*
8UZ3|1|1|G|1163
8UZ3|1|1|C|1164
*
8UZ3|1|1|G|1185
8UZ3|1|1|G|1186
8UZ3|1|1|G|1187
8UZ3|1|1|U|1188
8UZ3|1|1|A|1189
8UZ3|1|1|G|1190

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 3
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30
Chain e
50S ribosomal protein L35

Coloring options:

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