J7_8VVT_001
3D structure
- PDB id
- 8VVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the rotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAAAGU*AG*UGGG*CGCU(OMG)C*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 8VVT|1|WA|G|1859
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VVT|1|WA|C|1671
8VVT|1|WA|A|1672
8VVT|1|WA|A|1673
8VVT|1|WA|A|1674
8VVT|1|WA|G|1675
8VVT|1|WA|U|1676
*
8VVT|1|WA|A|1689
8VVT|1|WA|G|1690
*
8VVT|1|WA|U|1857
8VVT|1|WA|G|1858
8VVT|1|WA|G|1859
8VVT|1|WA|G|1860
*
8VVT|1|WA|C|1884
8VVT|1|WA|G|1885
8VVT|1|WA|C|1886
8VVT|1|WA|U|1887
8VVT|1|WA|OMG|1888
8VVT|1|WA|C|1889
*
8VVT|1|WA|G|1900
8VVT|1|WA|A|1901
8VVT|1|WA|A|1902
8VVT|1|WA|C|1903
8VVT|1|WA|G|1904
*
8VVT|1|WA|C|2082
8VVT|1|WA|C|2083
*
8VVT|1|WA|G|2283
8VVT|1|WA|A|2284
8VVT|1|WA|G|2285
8VVT|1|WA|U|2286
8VVT|1|WA|A|2287
8VVT|1|WA|G|2288
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain AA
- eL29
- Chain C
- uL4
- Chain DA
- eL32
- Chain EA
- eL33
- Chain F
- uL30
- Chain K
- eL13
- Chain P
- eL18
- Chain S
- eL21
- Chain XA
- 5S ribosomal RNA; 5S rRNA
- Chain Z
- uL15
Coloring options: