J7_8WV1_004
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- CGAAAU*AG*UGAG*CGAGCGC*GAGAC*GG*CGGUAG
- Length
- 32 nucleotides
- Bulged bases
- 8WV1|1|a|A|990, 8WV1|1|a|C|1020
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8WV1|1|a|C|864
8WV1|1|a|G|865
8WV1|1|a|A|866
8WV1|1|a|A|867
8WV1|1|a|A|868
8WV1|1|a|U|869
*
8WV1|1|a|A|882
8WV1|1|a|G|883
*
8WV1|1|a|U|988
8WV1|1|a|G|989
8WV1|1|a|A|990
8WV1|1|a|G|991
*
8WV1|1|a|C|1016
8WV1|1|a|G|1017
8WV1|1|a|A|1018
8WV1|1|a|G|1019
8WV1|1|a|C|1020
8WV1|1|a|G|1021
8WV1|1|a|C|1022
*
8WV1|1|a|G|1033
8WV1|1|a|A|1034
8WV1|1|a|G|1035
8WV1|1|a|A|1036
8WV1|1|a|C|1037
*
8WV1|1|a|G|1209
8WV1|1|a|G|1210
*
8WV1|1|a|C|1230
8WV1|1|a|G|1231
8WV1|1|a|G|1232
8WV1|1|a|U|1233
8WV1|1|a|A|1234
8WV1|1|a|G|1235
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 8
- 50S ribosomal protein L35
- Chain b
- 5S ribosomal RNA; 5S rRNA
- Chain k
- 50S ribosomal protein L15
- Chain p
- 50S ribosomal protein L20
- Chain q
- 50S ribosomal protein L21
- Chain y
- 50S ribosomal protein L30
Coloring options: