J7_9B0S_002
3D structure
- PDB id
- 9B0S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human top-top di-ribosome structure (Composite map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CGCUGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 9B0S|1|l5|G|1854
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9B0S|1|l5|C|1666
9B0S|1|l5|G|1667
9B0S|1|l5|A|1668
9B0S|1|l5|A|1669
9B0S|1|l5|G|1670
9B0S|1|l5|U|1671
*
9B0S|1|l5|A|1684
9B0S|1|l5|G|1685
*
9B0S|1|l5|U|1852
9B0S|1|l5|G|1853
9B0S|1|l5|G|1854
9B0S|1|l5|G|1855
*
9B0S|1|l5|C|1879
9B0S|1|l5|G|1880
9B0S|1|l5|C|1881
9B0S|1|l5|U|1882
9B0S|1|l5|G|1883
9B0S|1|l5|C|1884
*
9B0S|1|l5|G|1895
9B0S|1|l5|A|1896
9B0S|1|l5|A|1897
9B0S|1|l5|C|1898
9B0S|1|l5|G|1899
*
9B0S|1|l5|C|2077
9B0S|1|l5|C|2078
*
9B0S|1|l5|G|2278
9B0S|1|l5|A|2279
9B0S|1|l5|G|2280
9B0S|1|l5|U|2281
9B0S|1|l5|A|2282
9B0S|1|l5|G|2283
Current chains
- Chain l5
- 28S rRNA [Homo sapiens]
Nearby chains
- Chain l7
- 5S ribosomal RNA; 5S rRNA
- Chain lC
- 60S ribosomal protein L4
- Chain lF
- 60S ribosomal protein L7
- Chain lL
- Large ribosomal subunit protein eL13
- Chain lQ
- 60S ribosomal protein L18
- Chain lT
- 60S ribosomal protein L21
- Chain la
- 60S ribosomal protein L27a
- Chain lb
- Large ribosomal subunit protein eL29
- Chain le
- 60S ribosomal protein L32
- Chain lf
- 60S ribosomal protein L35a
Coloring options: