J7_9BH5_001
3D structure
- PDB id
- 9BH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution C. elegans 80S ribosome structure - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CGCUGU*AAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 9BH5|1|A5|G|1168
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BH5|1|A5|C|1004
9BH5|1|A5|G|1005
9BH5|1|A5|A|1006
9BH5|1|A5|A|1007
9BH5|1|A5|G|1008
9BH5|1|A5|U|1009
*
9BH5|1|A5|A|1022
9BH5|1|A5|G|1023
*
9BH5|1|A5|U|1166
9BH5|1|A5|G|1167
9BH5|1|A5|G|1168
9BH5|1|A5|G|1169
*
9BH5|1|A5|C|1193
9BH5|1|A5|G|1194
9BH5|1|A5|C|1195
9BH5|1|A5|U|1196
9BH5|1|A5|G|1197
9BH5|1|A5|U|1198
*
9BH5|1|A5|A|1209
9BH5|1|A5|A|1210
9BH5|1|A5|A|1211
9BH5|1|A5|C|1212
9BH5|1|A5|G|1213
*
9BH5|1|A5|C|1390
9BH5|1|A5|C|1391
*
9BH5|1|A5|G|1429
9BH5|1|A5|A|1430
9BH5|1|A5|G|1431
9BH5|1|A5|U|1432
9BH5|1|A5|A|1433
9BH5|1|A5|G|1434
Current chains
- Chain A5
- 28S rRNA
Nearby chains
- Chain A7
- 5S ribosomal RNA; 5S rRNA
- Chain CC
- Large ribosomal subunit protein uL4
- Chain CF
- Large ribosomal subunit protein uL30
- Chain CL
- Large ribosomal subunit protein eL13
- Chain CQ
- Large ribosomal subunit protein eL18
- Chain CT
- Large ribosomal subunit protein eL21
- Chain Ca
- Large ribosomal subunit protein uL15
- Chain Cb
- 60S ribosomal protein L29
- Chain Ce
- Large ribosomal subunit protein eL32
- Chain Cf
- Large ribosomal subunit protein eL33
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