J7_9E6Q_001
3D structure
- PDB id
- 9E6Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Pyrobaculum calidifontis 50S ribosomal subunit in complex with Dri
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.95 Å
Loop
- Sequence
- CGAAGC*GGC*GGCGG*CGAGAC*GAGAC*GC*GGGUAG
- Length
- 33 nucleotides
- Bulged bases
- 9E6Q|1|1|G|1066
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9E6Q|1|1|C|935
9E6Q|1|1|G|936
9E6Q|1|1|A|937
9E6Q|1|1|A|938
9E6Q|1|1|G|939
9E6Q|1|1|C|940
*
9E6Q|1|1|G|953
9E6Q|1|1|G|954
9E6Q|1|1|C|955
*
9E6Q|1|1|G|1063
9E6Q|1|1|G|1064
9E6Q|1|1|C|1065
9E6Q|1|1|G|1066
9E6Q|1|1|G|1067
*
9E6Q|1|1|C|1092
9E6Q|1|1|G|1093
9E6Q|1|1|A|1094
9E6Q|1|1|G|1095
9E6Q|1|1|A|1096
9E6Q|1|1|C|1097
*
9E6Q|1|1|G|1108
9E6Q|1|1|A|1109
9E6Q|1|1|G|1110
9E6Q|1|1|A|1111
9E6Q|1|1|C|1112
*
9E6Q|1|1|G|1289
9E6Q|1|1|C|1290
*
9E6Q|1|1|G|1313
9E6Q|1|1|G|1314
9E6Q|1|1|G|1315
9E6Q|1|1|U|1316
9E6Q|1|1|A|1317
9E6Q|1|1|G|1318
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain 2
- 5S ribosomal RNA; 5S rRNA
- Chain AL
- Large ribosomal subunit protein uL15
- Chain AY
- Large ribosomal subunit protein uL30
- Chain Ab
- Large ribosomal subunit protein eL32
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