J7_9GFT_003
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
- Length
- 35 nucleotides
- Bulged bases
- 9GFT|1|N|U|12, 9GFT|1|N|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9GFT|1|N|C|8
9GFT|1|N|G|9
9GFT|1|N|A|10
9GFT|1|N|C|11
9GFT|1|N|U|12
9GFT|1|N|A|13
9GFT|1|N|A|14
9GFT|1|N|G|15
*
9GFT|1|N|U|525
9GFT|1|N|A|526
9GFT|1|N|C|527
9GFT|1|N|A|528
9GFT|1|N|A|529
9GFT|1|N|G|530
9GFT|1|N|C|531
*
9GFT|1|N|G|2018
9GFT|1|N|A|2019
9GFT|1|N|A|2020
9GFT|1|N|C|2021
9GFT|1|N|U|2022
9GFT|1|N|C|2023
*
9GFT|1|N|G|2040
9GFT|1|N|U|2041
9GFT|1|N|A|2042
9GFT|1|N|C|2043
*
9GFT|1|N|G|2625
9GFT|1|N|C|2626
9GFT|1|N|G|2627
9GFT|1|N|C|2628
9GFT|1|N|U|2629
9GFT|1|N|G|2630
*
9GFT|1|N|C|2788
9GFT|1|N|C|2789
*
9GFT|1|N|G|2894
9GFT|1|N|G|2895
Current chains
- Chain N
- 23S RNA
Nearby chains
- Chain Q
- 50S ribosomal protein L3
- Chain W
- Large ribosomal subunit protein uL13
- Chain d
- Large ribosomal subunit protein bL20
- Chain f
- Large ribosomal subunit protein uL22
- Chain n
- Large ribosomal subunit protein bL32
Coloring options: