J7_9GFT_004
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
- Length
- 36 nucleotides
- Bulged bases
- 9GFT|1|N|A|945
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9GFT|1|N|C|817
9GFT|1|N|G|818
9GFT|1|N|A|819
9GFT|1|N|A|820
9GFT|1|N|A|821
9GFT|1|N|G|822
*
9GFT|1|N|C|835
9GFT|1|N|G|836
9GFT|1|N|C|837
9GFT|1|N|C|838
*
9GFT|1|N|G|940
9GFT|1|N|A|941
9GFT|1|N|G|942
9GFT|1|N|A|943
9GFT|1|N|C|944
9GFT|1|N|A|945
9GFT|1|N|C|946
*
9GFT|1|N|G|971
9GFT|1|N|A|972
9GFT|1|N|A|973
9GFT|1|N|G|974
9GFT|1|N|A|975
9GFT|1|N|G|976
*
9GFT|1|N|C|987
9GFT|1|N|A|988
9GFT|1|N|G|989
9GFT|1|N|A|990
9GFT|1|N|C|991
*
9GFT|1|N|G|1163
9GFT|1|N|C|1164
*
9GFT|1|N|G|1185
9GFT|1|N|G|1186
9GFT|1|N|G|1187
9GFT|1|N|U|1188
9GFT|1|N|A|1189
9GFT|1|N|G|1190
Current chains
- Chain N
- 23S RNA
Nearby chains
- Chain O
- 5S ribosomal RNA; 5S rRNA
- Chain Y
- Large ribosomal subunit protein uL15
- Chain d
- Large ribosomal subunit protein bL20
- Chain e
- Large ribosomal subunit protein bL21
- Chain m
- Large ribosomal subunit protein uL30
- Chain q
- Large ribosomal subunit protein bL35
Coloring options: