3D structure

PDB id
9H3K (explore in PDB, NAKB, or RNA 3D Hub)
Description
50S subunit precursor d126_(L29)-/(L22)-
Experimental method
ELECTRON MICROSCOPY
Resolution
6.62 Å

Loop

Sequence
CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
33 nucleotides
Bulged bases
9H3K|1|A|A|945
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9H3K|1|A|C|817
9H3K|1|A|G|818
9H3K|1|A|A|819
9H3K|1|A|A|820
9H3K|1|A|A|821
9H3K|1|A|G|822
*
9H3K|1|A|C|835
9H3K|1|A|G|836
9H3K|1|A|C|837
*
9H3K|1|A|G|942
9H3K|1|A|A|943
9H3K|1|A|C|944
9H3K|1|A|A|945
9H3K|1|A|C|946
*
9H3K|1|A|G|971
9H3K|1|A|A|972
9H3K|1|A|A|973
9H3K|1|A|G|974
9H3K|1|A|A|975
9H3K|1|A|G|976
*
9H3K|1|A|C|987
9H3K|1|A|A|988
9H3K|1|A|G|989
9H3K|1|A|A|990
9H3K|1|A|C|991
*
9H3K|1|A|G|1163
9H3K|1|A|C|1164
*
9H3K|1|A|G|1185
9H3K|1|A|G|1186
9H3K|1|A|G|1187
9H3K|1|A|U|1188
9H3K|1|A|A|1189
9H3K|1|A|G|1190

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain L
Large ribosomal subunit protein uL15
Chain Q
Large ribosomal subunit protein bL20
Chain R
Large ribosomal subunit protein bL21

Coloring options:

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