3D structure

PDB id
9H3L (explore in PDB, NAKB, or RNA 3D Hub)
Description
50S subunit precursor C_(L29)-/(L22)-
Experimental method
ELECTRON MICROSCOPY
Resolution
5.84 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
9H3L|1|A|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9H3L|1|A|C|8
9H3L|1|A|G|9
9H3L|1|A|A|10
9H3L|1|A|C|11
9H3L|1|A|U|12
9H3L|1|A|A|13
9H3L|1|A|A|14
9H3L|1|A|G|15
*
9H3L|1|A|U|525
9H3L|1|A|A|526
9H3L|1|A|C|527
9H3L|1|A|A|528
9H3L|1|A|A|529
9H3L|1|A|G|530
9H3L|1|A|C|531
*
9H3L|1|A|G|2018
9H3L|1|A|A|2019
9H3L|1|A|A|2020
9H3L|1|A|C|2021
9H3L|1|A|U|2022
9H3L|1|A|C|2023
*
9H3L|1|A|G|2040
9H3L|1|A|U|2041
9H3L|1|A|A|2042
9H3L|1|A|C|2043
*
9H3L|1|A|G|2625
9H3L|1|A|C|2626
9H3L|1|A|G|2627
9H3L|1|A|C|2628
9H3L|1|A|U|2629
9H3L|1|A|G|2630
*
9H3L|1|A|C|2788
9H3L|1|A|C|2789
*
9H3L|1|A|G|2894
9H3L|1|A|G|2895

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain D
50S ribosomal protein L3
Chain J
Large ribosomal subunit protein uL13
Chain Q
Large ribosomal subunit protein bL20
Chain R
Large ribosomal subunit protein bL21

Coloring options:

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