3D structure

PDB id
9H3P (explore in PDB, NAKB, or RNA 3D Hub)
Description
50S subunit precursor C-CP_(L22)-
Experimental method
ELECTRON MICROSCOPY
Resolution
7.06 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
9H3P|1|A|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9H3P|1|A|C|817
9H3P|1|A|G|818
9H3P|1|A|A|819
9H3P|1|A|A|820
9H3P|1|A|A|821
9H3P|1|A|G|822
*
9H3P|1|A|C|835
9H3P|1|A|G|836
9H3P|1|A|C|837
9H3P|1|A|C|838
*
9H3P|1|A|G|940
9H3P|1|A|A|941
9H3P|1|A|G|942
9H3P|1|A|A|943
9H3P|1|A|C|944
9H3P|1|A|A|945
9H3P|1|A|C|946
*
9H3P|1|A|G|971
9H3P|1|A|A|972
9H3P|1|A|A|973
9H3P|1|A|G|974
9H3P|1|A|A|975
9H3P|1|A|G|976
*
9H3P|1|A|C|987
9H3P|1|A|A|988
9H3P|1|A|G|989
9H3P|1|A|A|990
9H3P|1|A|C|991
*
9H3P|1|A|G|1163
9H3P|1|A|C|1164
*
9H3P|1|A|G|1185
9H3P|1|A|G|1186
9H3P|1|A|G|1187
9H3P|1|A|U|1188
9H3P|1|A|A|1189
9H3P|1|A|G|1190

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain B
5S ribosomal RNA; 5S rRNA
Chain L
Large ribosomal subunit protein uL15
Chain Q
Large ribosomal subunit protein bL20
Chain R
Large ribosomal subunit protein bL21
Chain Z
Large ribosomal subunit protein uL30

Coloring options:

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