J7_9HAL_001

3D structure

PDB id

9HAL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit d126_(L29)-/(L22)- precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.49 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

9HAL|1|A|C|2021

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HAL|1|A|C|8
9HAL|1|A|G|9
9HAL|1|A|A|10
9HAL|1|A|C|11
9HAL|1|A|U|12
9HAL|1|A|A|13
9HAL|1|A|A|14
9HAL|1|A|G|15
*
9HAL|1|A|U|525
9HAL|1|A|A|526
9HAL|1|A|C|527
9HAL|1|A|A|528
9HAL|1|A|A|529
9HAL|1|A|G|530
9HAL|1|A|C|531
*
9HAL|1|A|G|2018
9HAL|1|A|A|2019
9HAL|1|A|A|2020
9HAL|1|A|C|2021
9HAL|1|A|U|2022
9HAL|1|A|C|2023
*
9HAL|1|A|G|2040
9HAL|1|A|U|2041
9HAL|1|A|A|2042
9HAL|1|A|C|2043
*
9HAL|1|A|G|2625
9HAL|1|A|C|2626
9HAL|1|A|G|2627
9HAL|1|A|C|2628
9HAL|1|A|U|2629
9HAL|1|A|G|2630
*
9HAL|1|A|C|2788
9HAL|1|A|C|2789
*
9HAL|1|A|G|2894
9HAL|1|A|G|2895

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain J

Large ribosomal subunit protein uL13

Chain Q

Large ribosomal subunit protein bL20