3D structure

PDB id
9HAL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pooled 50S subunit d126_(L29)-/(L22)- precursor states supplemented with Api137
Experimental method
ELECTRON MICROSCOPY
Resolution
4.49 Å

Loop

Sequence
CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
33 nucleotides
Bulged bases
9HAL|1|A|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9HAL|1|A|C|817
9HAL|1|A|G|818
9HAL|1|A|A|819
9HAL|1|A|A|820
9HAL|1|A|A|821
9HAL|1|A|G|822
*
9HAL|1|A|C|835
9HAL|1|A|G|836
9HAL|1|A|C|837
*
9HAL|1|A|G|942
9HAL|1|A|A|943
9HAL|1|A|C|944
9HAL|1|A|A|945
9HAL|1|A|C|946
*
9HAL|1|A|G|971
9HAL|1|A|A|972
9HAL|1|A|A|973
9HAL|1|A|G|974
9HAL|1|A|A|975
9HAL|1|A|G|976
*
9HAL|1|A|C|987
9HAL|1|A|A|988
9HAL|1|A|G|989
9HAL|1|A|A|990
9HAL|1|A|C|991
*
9HAL|1|A|G|1163
9HAL|1|A|C|1164
*
9HAL|1|A|G|1185
9HAL|1|A|G|1186
9HAL|1|A|G|1187
9HAL|1|A|U|1188
9HAL|1|A|A|1189
9HAL|1|A|G|1190

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain L
Large ribosomal subunit protein uL15
Chain Q
Large ribosomal subunit protein bL20
Chain R
Large ribosomal subunit protein bL21

Coloring options:

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