J7_9HM0_001
3D structure
- PDB id
- 9HM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUUAAAG*UAUAAGC*GAAAUC*GUAC*GAAAUAU*AUUA*UUA
- Length
- 38 nucleotides
- Bulged bases
- 9HM0|1|AA|A|1921, 9HM0|1|AA|U|2896
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HM0|1|AA|U|43
9HM0|1|AA|U|44
9HM0|1|AA|U|45
9HM0|1|AA|A|46
9HM0|1|AA|A|47
9HM0|1|AA|A|48
9HM0|1|AA|G|49
*
9HM0|1|AA|U|422
9HM0|1|AA|A|423
9HM0|1|AA|U|424
9HM0|1|AA|A|425
9HM0|1|AA|A|426
9HM0|1|AA|G|427
9HM0|1|AA|C|428
*
9HM0|1|AA|G|1918
9HM0|1|AA|A|1919
9HM0|1|AA|A|1920
9HM0|1|AA|A|1921
9HM0|1|AA|U|1922
9HM0|1|AA|C|1923
*
9HM0|1|AA|G|1940
9HM0|1|AA|U|1941
9HM0|1|AA|A|1942
9HM0|1|AA|C|1943
*
9HM0|1|AA|G|2892
9HM0|1|AA|A|2893
9HM0|1|AA|A|2894
9HM0|1|AA|A|2895
9HM0|1|AA|U|2896
9HM0|1|AA|A|2897
9HM0|1|AA|U|2898
*
9HM0|1|AA|A|3120
9HM0|1|AA|U|3121
9HM0|1|AA|U|3122
9HM0|1|AA|A|3123
*
9HM0|1|AA|U|3260
9HM0|1|AA|U|3261
9HM0|1|AA|A|3262
Current chains
- Chain AA
- 21S mitochondrial rRNA
Nearby chains
- Chain 55
- Large ribosomal subunit protein mL44
- Chain CC
- Large ribosomal subunit protein uL3m
- Chain HH
- Large ribosomal subunit protein uL13m
- Chain LL
- Large ribosomal subunit protein bL17m
- Chain MM
- Large ribosomal subunit protein bL19m
- Chain NN
- Large ribosomal subunit protein bL21m
- Chain OO
- Large ribosomal subunit protein uL22m
- Chain WW
- Large ribosomal subunit protein bL32m
- Chain aa
- Large ribosomal subunit protein mL58
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