J7_9I3L_001
3D structure
- PDB id
- 9I3L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
- Length
- 35 nucleotides
- Bulged bases
- 9I3L|1|b|C|2025
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9I3L|1|b|C|8
9I3L|1|b|G|9
9I3L|1|b|A|10
9I3L|1|b|C|11
9I3L|1|b|U|12
9I3L|1|b|A|13
9I3L|1|b|A|14
9I3L|1|b|G|15
*
9I3L|1|b|U|525
9I3L|1|b|A|526
9I3L|1|b|C|527
9I3L|1|b|A|528
9I3L|1|b|A|529
9I3L|1|b|G|530
9I3L|1|b|C|531
*
9I3L|1|b|G|2022
9I3L|1|b|A|2023
9I3L|1|b|A|2024
9I3L|1|b|C|2025
9I3L|1|b|U|2026
9I3L|1|b|C|2027
*
9I3L|1|b|G|2044
9I3L|1|b|U|2045
9I3L|1|b|A|2046
9I3L|1|b|C|2047
*
9I3L|1|b|G|2629
9I3L|1|b|C|2630
9I3L|1|b|G|2631
9I3L|1|b|C|2632
9I3L|1|b|U|2633
9I3L|1|b|G|2634
*
9I3L|1|b|C|2792
9I3L|1|b|C|2793
*
9I3L|1|b|G|2898
9I3L|1|b|G|2899
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL32
- Chain d
- 50S ribosomal protein L3
- Chain j
- Large ribosomal subunit protein uL13
- Chain q
- Large ribosomal subunit protein bL20
- Chain s
- Large ribosomal subunit protein uL22
Coloring options: