J7_9I5V_001
3D structure
- PDB id
- 9I5V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S P. gingivalis ribosome erm-delta-porN strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CGAAAU*AG*UGAG*CGAGAG*CGGAC*GG*CGGUAG
- Length
- 31 nucleotides
- Bulged bases
- 9I5V|1|A|A|978
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9I5V|1|A|C|852
9I5V|1|A|G|853
9I5V|1|A|A|854
9I5V|1|A|A|855
9I5V|1|A|A|856
9I5V|1|A|U|857
*
9I5V|1|A|A|870
9I5V|1|A|G|871
*
9I5V|1|A|U|976
9I5V|1|A|G|977
9I5V|1|A|A|978
9I5V|1|A|G|979
*
9I5V|1|A|C|1004
9I5V|1|A|G|1005
9I5V|1|A|A|1006
9I5V|1|A|G|1007
9I5V|1|A|A|1008
9I5V|1|A|G|1009
*
9I5V|1|A|C|1020
9I5V|1|A|G|1021
9I5V|1|A|G|1022
9I5V|1|A|A|1023
9I5V|1|A|C|1024
*
9I5V|1|A|G|1198
9I5V|1|A|G|1199
*
9I5V|1|A|C|1214
9I5V|1|A|G|1215
9I5V|1|A|G|1216
9I5V|1|A|U|1217
9I5V|1|A|A|1218
9I5V|1|A|G|1219
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein uL30
- Chain 7
- Large ribosomal subunit protein bL35
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain O
- Large ribosomal subunit protein uL15
- Chain T
- Large ribosomal subunit protein bL20
- Chain U
- Large ribosomal subunit protein bL21
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