J7_9PJ7_001
3D structure
- PDB id
- 9PJ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- C. acnes 70S ribosome bound to Doxycycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CGAAAU*AG*UGAG*CGAGAG*CAGAU*GC*GGGUAG
- Length
- 31 nucleotides
- Bulged bases
- 9PJ7|1|a|A|1028
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PJ7|1|a|C|902
9PJ7|1|a|G|903
9PJ7|1|a|A|904
9PJ7|1|a|A|905
9PJ7|1|a|A|906
9PJ7|1|a|U|907
*
9PJ7|1|a|A|920
9PJ7|1|a|G|921
*
9PJ7|1|a|U|1026
9PJ7|1|a|G|1027
9PJ7|1|a|A|1028
9PJ7|1|a|G|1029
*
9PJ7|1|a|C|1054
9PJ7|1|a|G|1055
9PJ7|1|a|A|1056
9PJ7|1|a|G|1057
9PJ7|1|a|A|1058
9PJ7|1|a|G|1059
*
9PJ7|1|a|C|1070
9PJ7|1|a|A|1071
9PJ7|1|a|G|1072
9PJ7|1|a|A|1073
9PJ7|1|a|U|1074
*
9PJ7|1|a|G|1247
9PJ7|1|a|C|1248
*
9PJ7|1|a|G|1262
9PJ7|1|a|G|1263
9PJ7|1|a|G|1264
9PJ7|1|a|U|1265
9PJ7|1|a|A|1266
9PJ7|1|a|G|1267
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein bL35
- Chain V
- 50S ribosomal protein bL37
- Chain b
- 5S ribosomal RNA; 5S rRNA
- Chain k
- 50S ribosomal protein L15
- Chain p
- 50S ribosomal protein L20
- Chain q
- Large ribosomal subunit protein bL21
- Chain y
- 50S ribosomal protein L30
Coloring options: