J7_9RHU_001
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CG(OMC)UGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 9RHU|1|A3|G|1793
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RHU|1|A3|C|1621
9RHU|1|A3|G|1622
9RHU|1|A3|A|1623
9RHU|1|A3|A|1624
9RHU|1|A3|G|1625
9RHU|1|A3|U|1626
*
9RHU|1|A3|A|1639
9RHU|1|A3|G|1640
*
9RHU|1|A3|U|1791
9RHU|1|A3|G|1792
9RHU|1|A3|G|1793
9RHU|1|A3|G|1794
*
9RHU|1|A3|C|1818
9RHU|1|A3|G|1819
9RHU|1|A3|OMC|1820
9RHU|1|A3|U|1821
9RHU|1|A3|G|1822
9RHU|1|A3|C|1823
*
9RHU|1|A3|G|1834
9RHU|1|A3|A|1835
9RHU|1|A3|A|1836
9RHU|1|A3|C|1837
9RHU|1|A3|G|1838
*
9RHU|1|A3|C|2016
9RHU|1|A3|C|2017
*
9RHU|1|A3|G|2121
9RHU|1|A3|A|2122
9RHU|1|A3|G|2123
9RHU|1|A3|U|2124
9RHU|1|A3|A|2125
9RHU|1|A3|G|2126
Current chains
- Chain A3
- 28S rRNA
Nearby chains
- Chain B2
- 60S ribosomal protein L7
- Chain B3
- 5S ribosomal RNA; 5S rRNA
- Chain F3
- Large ribosomal subunit protein uL4
- Chain H2
- Large ribosomal subunit protein eL13
- Chain M2
- eL18
- Chain P2
- 60S ribosomal protein L21
- Chain W2
- 60S ribosomal protein L27a
- Chain X2
- 60S ribosomal protein L29
- Chain a2
- Ribosomal protein L32
- Chain b2
- 60S ribosomal protein L35a
Coloring options: