J7_9RVC_001
3D structure
- PDB id
- 9RVC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- staphylococcus aureus 70S initiation complex with natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUAUUAAG*UACAAGU*AUAGUA*UUAC*GCGUAG*CC*GA
- Length
- 35 nucleotides
- Bulged bases
- 9RVC|1|a|G|575, 9RVC|1|a|G|2048
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RVC|1|a|U|8
9RVC|1|a|U|9
9RVC|1|a|A|10
9RVC|1|a|U|11
9RVC|1|a|U|12
9RVC|1|a|A|13
9RVC|1|a|A|14
9RVC|1|a|G|15
*
9RVC|1|a|U|570
9RVC|1|a|A|571
9RVC|1|a|C|572
9RVC|1|a|A|573
9RVC|1|a|A|574
9RVC|1|a|G|575
9RVC|1|a|U|576
*
9RVC|1|a|A|2045
9RVC|1|a|U|2046
9RVC|1|a|A|2047
9RVC|1|a|G|2048
9RVC|1|a|U|2049
9RVC|1|a|A|2050
*
9RVC|1|a|U|2067
9RVC|1|a|U|2068
9RVC|1|a|A|2069
9RVC|1|a|C|2070
*
9RVC|1|a|G|2652
9RVC|1|a|C|2653
9RVC|1|a|G|2654
9RVC|1|a|U|2655
9RVC|1|a|A|2656
9RVC|1|a|G|2657
*
9RVC|1|a|C|2815
9RVC|1|a|C|2816
*
9RVC|1|a|G|2913
9RVC|1|a|A|2914
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain J
- Large ribosomal subunit protein uL13
- Chain d
- Large ribosomal subunit protein uL3
- Chain p
- Large ribosomal subunit protein bL20
- Chain q
- Large ribosomal subunit protein bL21
- Chain r
- Large ribosomal subunit protein uL22
- Chain z
- Large ribosomal subunit protein bL32
Coloring options: