J7_9RVC_002
3D structure
- PDB id
- 9RVC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- staphylococcus aureus 70S initiation complex with natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGAAAU*AG*UCAG*CGAAAG*CAGAC*GA*UGGUAG
- Length
- 31 nucleotides
- Bulged bases
- 9RVC|1|a|A|989
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RVC|1|a|C|862
9RVC|1|a|G|863
9RVC|1|a|A|864
9RVC|1|a|A|865
9RVC|1|a|A|866
9RVC|1|a|U|867
*
9RVC|1|a|A|880
9RVC|1|a|G|881
*
9RVC|1|a|U|987
9RVC|1|a|C|988
9RVC|1|a|A|989
9RVC|1|a|G|990
*
9RVC|1|a|C|1015
9RVC|1|a|G|1016
9RVC|1|a|A|1017
9RVC|1|a|A|1018
9RVC|1|a|A|1019
9RVC|1|a|G|1020
*
9RVC|1|a|C|1031
9RVC|1|a|A|1032
9RVC|1|a|G|1033
9RVC|1|a|A|1034
9RVC|1|a|C|1035
*
9RVC|1|a|G|1207
9RVC|1|a|A|1208
*
9RVC|1|a|U|1224
9RVC|1|a|G|1225
9RVC|1|a|G|1226
9RVC|1|a|U|1227
9RVC|1|a|A|1228
9RVC|1|a|G|1229
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein bL35
- Chain b
- 5S ribosomal RNA; 5S rRNA
- Chain k
- Large ribosomal subunit protein uL15
- Chain p
- Large ribosomal subunit protein bL20
- Chain q
- Large ribosomal subunit protein bL21
- Chain y
- Large ribosomal subunit protein uL30
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