J7_9SYR_001
3D structure
- PDB id
- 9SYR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.55 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CG(OMC)UGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 9SYR|1|L1|G|1854
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SYR|1|L1|C|1666
9SYR|1|L1|G|1667
9SYR|1|L1|A|1668
9SYR|1|L1|A|1669
9SYR|1|L1|G|1670
9SYR|1|L1|U|1671
*
9SYR|1|L1|A|1684
9SYR|1|L1|G|1685
*
9SYR|1|L1|U|1852
9SYR|1|L1|G|1853
9SYR|1|L1|G|1854
9SYR|1|L1|G|1855
*
9SYR|1|L1|C|1879
9SYR|1|L1|G|1880
9SYR|1|L1|OMC|1881
9SYR|1|L1|U|1882
9SYR|1|L1|G|1883
9SYR|1|L1|C|1884
*
9SYR|1|L1|G|1895
9SYR|1|L1|A|1896
9SYR|1|L1|A|1897
9SYR|1|L1|C|1898
9SYR|1|L1|G|1899
*
9SYR|1|L1|C|2077
9SYR|1|L1|C|2078
*
9SYR|1|L1|G|2278
9SYR|1|L1|A|2279
9SYR|1|L1|G|2280
9SYR|1|L1|U|2281
9SYR|1|L1|A|2282
9SYR|1|L1|G|2283
Current chains
- Chain L1
- 28S rRNA
Nearby chains
- Chain L2
- 5S ribosomal RNA; 5S rRNA
- Chain LI
- Large ribosomal subunit protein uL30
- Chain LP
- Large ribosomal subunit protein eL13
- Chain Lc
- 60S ribosomal protein L4
- Chain Lh
- 60S ribosomal protein L18
- Chain Lk
- 60S ribosomal protein L21
- Chain Lr
- 60S ribosomal protein L27a
- Chain Ls
- 60S ribosomal protein L29
- Chain Lv
- 60S ribosomal protein L32
- Chain Lw
- 60S ribosomal protein L35a
Coloring options: