J7_9T4R_001
3D structure
- PDB id
- 9T4R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S initiation complex with a natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- UUAUUAAG*UACAAGU*AUAGUA*UUAC*GCGUAG*CC*GA
- Length
- 35 nucleotides
- Bulged bases
- 9T4R|1|a|G|575, 9T4R|1|a|G|2046
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9T4R|1|a|U|8
9T4R|1|a|U|9
9T4R|1|a|A|10
9T4R|1|a|U|11
9T4R|1|a|U|12
9T4R|1|a|A|13
9T4R|1|a|A|14
9T4R|1|a|G|15
*
9T4R|1|a|U|570
9T4R|1|a|A|571
9T4R|1|a|C|572
9T4R|1|a|A|573
9T4R|1|a|A|574
9T4R|1|a|G|575
9T4R|1|a|U|576
*
9T4R|1|a|A|2043
9T4R|1|a|U|2044
9T4R|1|a|A|2045
9T4R|1|a|G|2046
9T4R|1|a|U|2047
9T4R|1|a|A|2048
*
9T4R|1|a|U|2065
9T4R|1|a|U|2066
9T4R|1|a|A|2067
9T4R|1|a|C|2068
*
9T4R|1|a|G|2650
9T4R|1|a|C|2651
9T4R|1|a|G|2652
9T4R|1|a|U|2653
9T4R|1|a|A|2654
9T4R|1|a|G|2655
*
9T4R|1|a|C|2813
9T4R|1|a|C|2814
*
9T4R|1|a|G|2911
9T4R|1|a|A|2912
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain J
- Large ribosomal subunit protein uL13
- Chain d
- Large ribosomal subunit protein uL3
- Chain p
- Large ribosomal subunit protein bL20
- Chain q
- Large ribosomal subunit protein bL21
- Chain r
- Large ribosomal subunit protein uL22
- Chain z
- Large ribosomal subunit protein bL32
Coloring options: