J7_9TZ5_001
3D structure
- PDB id
- 9TZ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Triple Stack Doxycycline Bound 50S Subunit of the Coxiella burnetii Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- UGAAUAAG*UACAAGC*GAAAUC*GUAC*GCGUUG*CC*GA
- Length
- 35 nucleotides
- Bulged bases
- 9TZ5|1|a|A|2037
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TZ5|1|a|U|16
9TZ5|1|a|G|17
9TZ5|1|a|A|18
9TZ5|1|a|A|19
9TZ5|1|a|U|20
9TZ5|1|a|A|21
9TZ5|1|a|A|22
9TZ5|1|a|G|23
*
9TZ5|1|a|U|530
9TZ5|1|a|A|531
9TZ5|1|a|C|532
9TZ5|1|a|A|533
9TZ5|1|a|A|534
9TZ5|1|a|G|535
9TZ5|1|a|C|536
*
9TZ5|1|a|G|2034
9TZ5|1|a|A|2035
9TZ5|1|a|A|2036
9TZ5|1|a|A|2037
9TZ5|1|a|U|2038
9TZ5|1|a|C|2039
*
9TZ5|1|a|G|2056
9TZ5|1|a|U|2057
9TZ5|1|a|A|2058
9TZ5|1|a|C|2059
*
9TZ5|1|a|G|2641
9TZ5|1|a|C|2642
9TZ5|1|a|G|2643
9TZ5|1|a|U|2644
9TZ5|1|a|U|2645
9TZ5|1|a|G|2646
*
9TZ5|1|a|C|2804
9TZ5|1|a|C|2805
*
9TZ5|1|a|G|2909
9TZ5|1|a|A|2910
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain d
- Large ribosomal subunit protein uL3
- Chain e
- Large ribosomal subunit protein bL20
- Chain i
- Large ribosomal subunit protein uL13
- Chain j
- Large ribosomal subunit protein uL22
- Chain v
- Large ribosomal subunit protein bL32
Coloring options: