J8_3J73_001
3D structure
- PDB id
- 3J73 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UUGA*UUUGA*UACA*UGUCCUAAGGCG*CGCUUG*CC*GGGGCCUCACGAUCCUUCU*AGGAGGUGUCAGAAAA
- Length
- 68 nucleotides
- Bulged bases
- 3J73|1|5|G|3922, 3J73|1|5|A|4203, 3J73|1|5|C|4231, 3J73|1|5|A|4234, 3J73|1|5|C|4332, 3J73|1|5|A|4376, 3J73|1|5|A|4378, 3J73|1|5|A|4379
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J73|1|5|U|3920
3J73|1|5|U|3921
3J73|1|5|G|3922
3J73|1|5|A|3923
*
3J73|1|5|U|4188
3J73|1|5|U|4189
3J73|1|5|U|4190
3J73|1|5|G|4191
3J73|1|5|A|4192
*
3J73|1|5|U|4202
3J73|1|5|A|4203
3J73|1|5|C|4204
3J73|1|5|A|4205
*
3J73|1|5|U|4227
3J73|1|5|G|4228
3J73|1|5|U|4229
3J73|1|5|C|4230
3J73|1|5|C|4231
3J73|1|5|U|4232
3J73|1|5|A|4233
3J73|1|5|A|4234
3J73|1|5|G|4235
3J73|1|5|G|4236
3J73|1|5|C|4237
3J73|1|5|G|4238
*
3J73|1|5|C|4286
3J73|1|5|G|4287
3J73|1|5|C|4288
3J73|1|5|U|4289
3J73|1|5|U|4290
3J73|1|5|G|4291
*
3J73|1|5|C|4318
3J73|1|5|C|4319
*
3J73|1|5|G|4328
3J73|1|5|G|4329
3J73|1|5|G|4330
3J73|1|5|G|4331
3J73|1|5|C|4332
3J73|1|5|C|4333
3J73|1|5|U|4334
3J73|1|5|C|4335
3J73|1|5|A|4336
3J73|1|5|C|4337
3J73|1|5|G|4338
3J73|1|5|A|4339
3J73|1|5|U|4340
3J73|1|5|C|4341
3J73|1|5|C|4342
3J73|1|5|U|4343
3J73|1|5|U|4344
3J73|1|5|C|4345
3J73|1|5|U|4346
*
3J73|1|5|A|4366
3J73|1|5|G|4367
3J73|1|5|G|4368
3J73|1|5|A|4369
3J73|1|5|G|4370
3J73|1|5|G|4371
3J73|1|5|U|4372
3J73|1|5|G|4373
3J73|1|5|U|4374
3J73|1|5|C|4375
3J73|1|5|A|4376
3J73|1|5|G|4377
3J73|1|5|A|4378
3J73|1|5|A|4379
3J73|1|5|A|4380
3J73|1|5|A|4381
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain A
- Ribosomal protein uL12
- Chain D
- Ribosomal protein uL18
- Chain I
- Ribosomal protein uL16
- Chain N
- Ribosomal protein eL15
- Chain Q
- Ribosomal protein eL18
- Chain S6
- Transfer RNA; tRNA
- Chain T
- Ribosomal protein eL21
- Chain a
- Ribosomal protein uL15
- Chain o
- Ribosomal protein eL42
Coloring options: