J8_6OGI_001
3D structure
- PDB id
- 6OGI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CGACUAAG*UACAAGC*GAACUC*GUACC*GGCGCUG*CCUGAC*GUCC*GAGG
- Length
- 47 nucleotides
- Bulged bases
- 6OGI|1|1|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OGI|1|1|C|8
6OGI|1|1|G|9
6OGI|1|1|A|10
6OGI|1|1|C|11
6OGI|1|1|U|12
6OGI|1|1|A|13
6OGI|1|1|A|14
6OGI|1|1|G|15
*
6OGI|1|1|U|525
6OGI|1|1|A|526
6OGI|1|1|C|527
6OGI|1|1|A|528
6OGI|1|1|A|529
6OGI|1|1|G|530
6OGI|1|1|C|531
*
6OGI|1|1|G|2018
6OGI|1|1|A|2019
6OGI|1|1|A|2020
6OGI|1|1|C|2021
6OGI|1|1|U|2022
6OGI|1|1|C|2023
*
6OGI|1|1|G|2040
6OGI|1|1|U|2041
6OGI|1|1|A|2042
6OGI|1|1|C|2043
6OGI|1|1|C|2044
*
6OGI|1|1|G|2624
6OGI|1|1|G|2625
6OGI|1|1|C|2626
6OGI|1|1|G|2627
6OGI|1|1|C|2628
6OGI|1|1|U|2629
6OGI|1|1|G|2630
*
6OGI|1|1|C|2788
6OGI|1|1|C|2789
6OGI|1|1|U|2790
6OGI|1|1|G|2791
6OGI|1|1|A|2792
6OGI|1|1|C|2793
*
6OGI|1|1|G|2803
6OGI|1|1|U|2804
6OGI|1|1|C|2805
6OGI|1|1|C|2806
*
6OGI|1|1|G|2892
6OGI|1|1|A|2893
6OGI|1|1|G|2894
6OGI|1|1|G|2895
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain B
- 50S ribosomal protein L32
- Chain c
- 50S ribosomal protein L3
- Chain j
- 50S ribosomal protein L13
- Chain q
- 50S ribosomal protein L20
- Chain s
- 50S ribosomal protein L22
Coloring options: