Loop J8_7MSM

3D structure

PDB id: 7MSM (explore in PDB, NAKB, or RNA 3D Hub)
Description: Mtb 70SIC in complex with MtbEttA at Trans_R0 state
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å

Loop

Sequence: GUGUCUAAG*UACAAUC*GCACUA*UUAC*GCGUCA*UCAC*GAUAAG*CGAAAAC
Length: 49 nucleotides
Bulged bases: None detected
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7MSM|1|A|G|7
7MSM|1|A|U|8
7MSM|1|A|G|9
7MSM|1|A|U|10
7MSM|1|A|C|11
7MSM|1|A|U|12
7MSM|1|A|A|13
7MSM|1|A|A|14
7MSM|1|A|G|15
*
7MSM|1|A|U|613
7MSM|1|A|A|614
7MSM|1|A|C|615
7MSM|1|A|A|616
7MSM|1|A|A|617
7MSM|1|A|U|618
7MSM|1|A|C|619
*
7MSM|1|A|G|2256
7MSM|1|A|C|2257
7MSM|1|A|A|2258
7MSM|1|A|C|2259
7MSM|1|A|U|2260
7MSM|1|A|A|2261
*
7MSM|1|A|U|2278
7MSM|1|A|U|2279
7MSM|1|A|A|2280
7MSM|1|A|C|2281
*
7MSM|1|A|G|2863
7MSM|1|A|C|2864
7MSM|1|A|G|2865
7MSM|1|A|U|2866
7MSM|1|A|C|2867
7MSM|1|A|A|2868
*
7MSM|1|A|U|3026
7MSM|1|A|C|3027
7MSM|1|A|A|3028
7MSM|1|A|C|3029
*
7MSM|1|A|G|3041
7MSM|1|A|A|3042
7MSM|1|A|U|3043
7MSM|1|A|A|3044
7MSM|1|A|A|3045
7MSM|1|A|G|3046
*
7MSM|1|A|C|3124
7MSM|1|A|G|3125
7MSM|1|A|A|3126
7MSM|1|A|A|3127
7MSM|1|A|A|3128
7MSM|1|A|A|3129
7MSM|1|A|C|3130

Current chains

Chain A: 23S rRNA

Nearby chains

Chain 0: 50S ribosomal protein L32
Chain D: 50S ribosomal protein L3
Chain J: 50S ribosomal protein L13
Chain Q: 50S ribosomal protein L20
Chain S: 50S ribosomal protein L22

J8_7MSM_001