Loop J8_7S0S

3D structure

PDB id: 7S0S (explore in PDB, NAKB, or RNA 3D Hub)
Description: M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å

Loop

Sequence: UGUUUAAG*UACAAUC*GCACUA*UUAC*GCGUCA*UCAC*GAUAAG*CGAAAA
Length: 47 nucleotides
Bulged bases: None detected
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7S0S|1|C|U|5
7S0S|1|C|G|6
7S0S|1|C|U|7
7S0S|1|C|U|8
7S0S|1|C|U|9
7S0S|1|C|A|10
7S0S|1|C|A|11
7S0S|1|C|G|12
*
7S0S|1|C|U|612
7S0S|1|C|A|613
7S0S|1|C|C|614
7S0S|1|C|A|615
7S0S|1|C|A|616
7S0S|1|C|U|617
7S0S|1|C|C|618
*
7S0S|1|C|G|2242
7S0S|1|C|C|2243
7S0S|1|C|A|2244
7S0S|1|C|C|2245
7S0S|1|C|U|2246
7S0S|1|C|A|2247
*
7S0S|1|C|U|2264
7S0S|1|C|U|2265
7S0S|1|C|A|2266
7S0S|1|C|C|2267
*
7S0S|1|C|G|2849
7S0S|1|C|C|2850
7S0S|1|C|G|2851
7S0S|1|C|U|2852
7S0S|1|C|C|2853
7S0S|1|C|A|2854
*
7S0S|1|C|U|3012
7S0S|1|C|C|3013
7S0S|1|C|A|3014
7S0S|1|C|C|3015
*
7S0S|1|C|G|3027
7S0S|1|C|A|3028
7S0S|1|C|U|3029
7S0S|1|C|A|3030
7S0S|1|C|A|3031
7S0S|1|C|G|3032
*
7S0S|1|C|C|3110
7S0S|1|C|G|3111
7S0S|1|C|A|3112
7S0S|1|C|A|3113
7S0S|1|C|A|3114
7S0S|1|C|A|3115

Current chains

Chain C: 23S rRNA

Nearby chains

Chain E: 50S ribosomal protein L3
Chain L: 50S ribosomal protein L13
Chain S: 50S ribosomal protein L20
Chain U: 50S ribosomal protein L22
Chain c: 50S ribosomal protein L32

J8_7S0S_001