Loop J8_7TTW

3D structure

PDB id: 7TTW (explore in PDB, NAKB, or RNA 3D Hub)
Description: 50S ribosomal subunit from Staphylococcus aureus containing double mutation in uL3 imparting linezolid resistance
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å

Loop

Sequence: UUAUUAAG*UACAAGU*AUAGUA*UUAC*GCGUAG*CCA*UAUAAG*CGAAGA
Length: 46 nucleotides
Bulged bases: 7TTW|1|1|G|575, 7TTW|1|1|G|2048
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7TTW|1|1|U|8
7TTW|1|1|U|9
7TTW|1|1|A|10
7TTW|1|1|U|11
7TTW|1|1|U|12
7TTW|1|1|A|13
7TTW|1|1|A|14
7TTW|1|1|G|15
*
7TTW|1|1|U|570
7TTW|1|1|A|571
7TTW|1|1|C|572
7TTW|1|1|A|573
7TTW|1|1|A|574
7TTW|1|1|G|575
7TTW|1|1|U|576
*
7TTW|1|1|A|2045
7TTW|1|1|U|2046
7TTW|1|1|A|2047
7TTW|1|1|G|2048
7TTW|1|1|U|2049
7TTW|1|1|A|2050
*
7TTW|1|1|U|2067
7TTW|1|1|U|2068
7TTW|1|1|A|2069
7TTW|1|1|C|2070
*
7TTW|1|1|G|2652
7TTW|1|1|C|2653
7TTW|1|1|G|2654
7TTW|1|1|U|2655
7TTW|1|1|A|2656
7TTW|1|1|G|2657
*
7TTW|1|1|C|2815
7TTW|1|1|C|2816
7TTW|1|1|A|2817
*
7TTW|1|1|U|2826
7TTW|1|1|A|2827
7TTW|1|1|U|2828
7TTW|1|1|A|2829
7TTW|1|1|A|2830
7TTW|1|1|G|2831
*
7TTW|1|1|C|2909
7TTW|1|1|G|2910
7TTW|1|1|A|2911
7TTW|1|1|A|2912
7TTW|1|1|G|2913
7TTW|1|1|A|2914

Current chains

Chain 1: 23S rRNA

Nearby chains

Chain C: 50S ribosomal protein L20
Chain E: 50S ribosomal protein L22
Chain L: 50S ribosomal protein L3
Chain N: 50S ribosomal protein L32
Chain V: 50S ribosomal protein L13

J8_7TTW_001