J9_4UJE_002
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- GUGGCGACC*GAGGAAAAGAAAC*GGAUU*AAGAG*CUAAAUACCGGCA*UGCGUCGAUGAAG*CGAACG*CG*UAC
- Length
- 69 nucleotides
- Bulged bases
- 4UJE|1|A2|A|66, 4UJE|1|A2|U|328, 4UJE|1|A2|C|331, 4UJE|1|A3|C|35, 4UJE|1|A3|U|38
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UJE|1|A2|G|19
4UJE|1|A2|U|20
4UJE|1|A2|G|21
4UJE|1|A2|G|22
4UJE|1|A2|C|23
4UJE|1|A2|G|24
4UJE|1|A2|A|25
4UJE|1|A2|C|26
4UJE|1|A2|C|27
*
4UJE|1|A2|G|55
4UJE|1|A2|A|56
4UJE|1|A2|G|57
4UJE|1|A2|G|58
4UJE|1|A2|A|59
4UJE|1|A2|A|60
4UJE|1|A2|A|61
4UJE|1|A2|A|62
4UJE|1|A2|G|63
4UJE|1|A2|A|64
4UJE|1|A2|A|65
4UJE|1|A2|A|66
4UJE|1|A2|C|67
*
4UJE|1|A2|G|74
4UJE|1|A2|G|75
4UJE|1|A2|A|76
4UJE|1|A2|U|77
4UJE|1|A2|U|78
*
4UJE|1|A2|A|105
4UJE|1|A2|A|106
4UJE|1|A2|G|107
4UJE|1|A2|A|108
4UJE|1|A2|G|109
*
4UJE|1|A2|C|323
4UJE|1|A2|U|324
4UJE|1|A2|A|325
4UJE|1|A2|A|326
4UJE|1|A2|A|327
4UJE|1|A2|U|328
4UJE|1|A2|A|329
4UJE|1|A2|C|330
4UJE|1|A2|C|331
4UJE|1|A2|G|332
4UJE|1|A2|G|333
4UJE|1|A2|C|334
4UJE|1|A2|A|335
*
4UJE|1|A3|U|30
4UJE|1|A3|G|31
4UJE|1|A3|C|32
4UJE|1|A3|G|33
4UJE|1|A3|U|34
4UJE|1|A3|C|35
4UJE|1|A3|G|36
4UJE|1|A3|A|37
4UJE|1|A3|U|38
4UJE|1|A3|G|39
4UJE|1|A3|A|40
4UJE|1|A3|A|41
4UJE|1|A3|G|42
*
4UJE|1|A3|C|101
4UJE|1|A3|G|102
4UJE|1|A3|A|103
4UJE|1|A3|A|104
4UJE|1|A3|C|105
4UJE|1|A3|G|106
*
4UJE|1|A3|C|113
4UJE|1|A3|G|114
*
4UJE|1|A3|U|136
4UJE|1|A3|A|137
4UJE|1|A3|C|138
Current chains
- Chain A2
- 28S Ribosomal RNA
- Chain A3
- 5.8S Ribosomal RNA
Nearby chains
- Chain CL
- 60S RIBOSOMAL PROTEIN L13
- Chain CN
- 60S RIBOSOMAL PROTEIN L15
- Chain CX
- 60S RIBOSOMAL PROTEIN L23A
- Chain Ch
- 60S RIBOSOMAL PROTEIN L35
- Chain Ci
- 60S RIBOSOMAL PROTEIN L36
- Chain Cj
- 60S RIBOSOMAL PROTEIN L37
- Chain Cl
- 60S RIBOSOMAL PROTEIN L39
Coloring options: