Loop J9_4V7D

3D structure

PDB id: 4V7D (explore in PDB, NAKB, or RNA 3D Hub)
Description: Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.6 Å

Loop

Sequence: GGCGAUGAAGG*CCGAAUG*CA*UAU*AGGCGAAC*GGAAAAGAAAU*AGAUU*AGCAGCC*GGCUAAAUAC
Length: 64 nucleotides
Bulged bases: 4V7D|1|AA|U|50, 4V7D|1|AA|A|223
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

4V7D|1|AA|G|45
4V7D|1|AA|G|46
4V7D|1|AA|C|47
4V7D|1|AA|G|48
4V7D|1|AA|A|49
4V7D|1|AA|U|50
4V7D|1|AA|G|51
4V7D|1|AA|A|52
4V7D|1|AA|A|53
4V7D|1|AA|G|54
4V7D|1|AA|G|55
*
4V7D|1|AA|C|115
4V7D|1|AA|C|116
4V7D|1|AA|G|117
4V7D|1|AA|A|118
4V7D|1|AA|A|119
4V7D|1|AA|U|120
4V7D|1|AA|G|121
*
4V7D|1|AA|C|130
4V7D|1|AA|A|131
*
4V7D|1|AA|U|148
4V7D|1|AA|A|149
4V7D|1|AA|U|150
*
4V7D|1|AA|A|176
4V7D|1|AA|G|177
4V7D|1|AA|G|178
4V7D|1|AA|C|179
4V7D|1|AA|G|180
4V7D|1|AA|A|181
4V7D|1|AA|A|182
4V7D|1|AA|C|183
*
4V7D|1|AA|G|214
4V7D|1|AA|G|215
4V7D|1|AA|A|216
4V7D|1|AA|A|217
4V7D|1|AA|A|218
4V7D|1|AA|A|219
4V7D|1|AA|G|220
4V7D|1|AA|A|221
4V7D|1|AA|A|222
4V7D|1|AA|A|223
4V7D|1|AA|U|224
*
4V7D|1|AA|A|231
4V7D|1|AA|G|232
4V7D|1|AA|A|233
4V7D|1|AA|U|234
4V7D|1|AA|U|235
*
4V7D|1|AA|A|262
4V7D|1|AA|G|263
4V7D|1|AA|C|264
4V7D|1|AA|A|265
4V7D|1|AA|G|266
4V7D|1|AA|C|267
4V7D|1|AA|C|268
*
4V7D|1|AA|G|424
4V7D|1|AA|G|425
4V7D|1|AA|C|426
4V7D|1|AA|U|427
4V7D|1|AA|A|428
4V7D|1|AA|A|429
4V7D|1|AA|A|430
4V7D|1|AA|U|431
4V7D|1|AA|A|432
4V7D|1|AA|C|433

Current chains

Chain AA: 23S ribosomal RNA

Nearby chains

Chain A6: 50S ribosomal protein L34

J9_4V7D_001