J9_6HTQ_001
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- UUAGAAAG*UACAAGU*AUAGUA*UUACCC*GGGCGCAG*CCAU*AGUAAGAUCC*GUUGAU*AAUCGAUCGAGGA
- Length
- 68 nucleotides
- Bulged bases
- 6HTQ|1|A|G|576, 6HTQ|1|A|G|2050, 6HTQ|1|A|U|2858, 6HTQ|1|A|A|2860
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HTQ|1|A|U|8
6HTQ|1|A|U|9
6HTQ|1|A|A|10
6HTQ|1|A|G|11
6HTQ|1|A|A|12
6HTQ|1|A|A|13
6HTQ|1|A|A|14
6HTQ|1|A|G|15
*
6HTQ|1|A|U|571
6HTQ|1|A|A|572
6HTQ|1|A|C|573
6HTQ|1|A|A|574
6HTQ|1|A|A|575
6HTQ|1|A|G|576
6HTQ|1|A|U|577
*
6HTQ|1|A|A|2047
6HTQ|1|A|U|2048
6HTQ|1|A|A|2049
6HTQ|1|A|G|2050
6HTQ|1|A|U|2051
6HTQ|1|A|A|2052
*
6HTQ|1|A|U|2069
6HTQ|1|A|U|2070
6HTQ|1|A|A|2071
6HTQ|1|A|C|2072
6HTQ|1|A|C|2073
6HTQ|1|A|C|2074
*
6HTQ|1|A|G|2652
6HTQ|1|A|G|2653
6HTQ|1|A|G|2654
6HTQ|1|A|C|2655
6HTQ|1|A|G|2656
6HTQ|1|A|C|2657
6HTQ|1|A|A|2658
6HTQ|1|A|G|2659
*
6HTQ|1|A|C|2817
6HTQ|1|A|C|2818
6HTQ|1|A|A|2819
6HTQ|1|A|U|2820
*
6HTQ|1|A|A|2831
6HTQ|1|A|G|2832
6HTQ|1|A|U|2833
6HTQ|1|A|A|2834
6HTQ|1|A|A|2835
6HTQ|1|A|G|2836
6HTQ|1|A|A|2837
6HTQ|1|A|U|2838
6HTQ|1|A|C|2839
6HTQ|1|A|C|2840
*
6HTQ|1|A|G|2856
6HTQ|1|A|U|2857
6HTQ|1|A|U|2858
6HTQ|1|A|G|2859
6HTQ|1|A|A|2860
6HTQ|1|A|U|2861
*
6HTQ|1|A|A|2907
6HTQ|1|A|A|2908
6HTQ|1|A|U|2909
6HTQ|1|A|C|2910
6HTQ|1|A|G|2911
6HTQ|1|A|A|2912
6HTQ|1|A|U|2913
6HTQ|1|A|C|2914
6HTQ|1|A|G|2915
6HTQ|1|A|A|2916
6HTQ|1|A|G|2917
6HTQ|1|A|G|2918
6HTQ|1|A|A|2919
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L32
- Chain D
- 50S ribosomal protein L3
- Chain J
- 50S ribosomal protein L13
- Chain N
- 50S ribosomal protein L17
- Chain Q
- 50S ribosomal protein L20
- Chain S
- 50S ribosomal protein L22
Coloring options: