J9_6OLF_002
3D structure
- PDB id
- 6OLF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUCGAUGAAG*CGAACG*CG*UAC*GUGGCGACC*GAGGAAAAGAAAC*GGAUU*AAGAG*CUAAAUAC
- Length
- 61 nucleotides
- Bulged bases
- 6OLF|1|D|U|34, 6OLF|1|D|U|38, 6OLF|1|t|A|66
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OLF|1|D|G|33
6OLF|1|D|U|34
6OLF|1|D|C|35
6OLF|1|D|G|36
6OLF|1|D|A|37
6OLF|1|D|U|38
6OLF|1|D|G|39
6OLF|1|D|A|40
6OLF|1|D|A|41
6OLF|1|D|G|42
*
6OLF|1|D|C|101
6OLF|1|D|G|102
6OLF|1|D|A|103
6OLF|1|D|A|104
6OLF|1|D|C|105
6OLF|1|D|G|106
*
6OLF|1|D|C|113
6OLF|1|D|G|114
*
6OLF|1|D|U|136
6OLF|1|D|A|137
6OLF|1|D|C|138
*
6OLF|1|t|G|19
6OLF|1|t|U|20
6OLF|1|t|G|21
6OLF|1|t|G|22
6OLF|1|t|C|23
6OLF|1|t|G|24
6OLF|1|t|A|25
6OLF|1|t|C|26
6OLF|1|t|C|27
*
6OLF|1|t|G|55
6OLF|1|t|A|56
6OLF|1|t|G|57
6OLF|1|t|G|58
6OLF|1|t|A|59
6OLF|1|t|A|60
6OLF|1|t|A|61
6OLF|1|t|A|62
6OLF|1|t|G|63
6OLF|1|t|A|64
6OLF|1|t|A|65
6OLF|1|t|A|66
6OLF|1|t|C|67
*
6OLF|1|t|G|74
6OLF|1|t|G|75
6OLF|1|t|A|76
6OLF|1|t|U|77
6OLF|1|t|U|78
*
6OLF|1|t|A|105
6OLF|1|t|A|106
6OLF|1|t|G|107
6OLF|1|t|A|108
6OLF|1|t|G|109
*
6OLF|1|t|C|326
6OLF|1|t|U|327
6OLF|1|t|A|328
6OLF|1|t|A|329
6OLF|1|t|A|330
6OLF|1|t|U|331
6OLF|1|t|A|332
6OLF|1|t|C|333
Current chains
- Chain D
- 5.8S ribosomal RNA
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain M
- 60S ribosomal protein L13
- Chain O
- 60S ribosomal protein L15
- Chain Y
- 60S ribosomal protein L23a
- Chain i
- 60S ribosomal protein L35
- Chain j
- 60S ribosomal protein L36
- Chain k
- 60S ribosomal protein L37
- Chain m
- 60S ribosomal protein L39
Coloring options: