J9_7NWG_002
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUGGCGAC*GGAAAAGAAAC*GGAUU*AAGAG*CUAAAUAC*GUCGAUGAAG*CGAACG*CG*UAC
- Length
- 58 nucleotides
- Bulged bases
- 7NWG|1|51|A|66, 7NWG|1|81|U|34, 7NWG|1|81|G|36, 7NWG|1|81|U|38
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWG|1|51|G|19
7NWG|1|51|U|20
7NWG|1|51|G|21
7NWG|1|51|G|22
7NWG|1|51|C|23
7NWG|1|51|G|24
7NWG|1|51|A|25
7NWG|1|51|C|26
*
7NWG|1|51|G|57
7NWG|1|51|G|58
7NWG|1|51|A|59
7NWG|1|51|A|60
7NWG|1|51|A|61
7NWG|1|51|A|62
7NWG|1|51|G|63
7NWG|1|51|A|64
7NWG|1|51|A|65
7NWG|1|51|A|66
7NWG|1|51|C|67
*
7NWG|1|51|G|74
7NWG|1|51|G|75
7NWG|1|51|A|76
7NWG|1|51|U|77
7NWG|1|51|U|78
*
7NWG|1|51|A|105
7NWG|1|51|A|106
7NWG|1|51|G|107
7NWG|1|51|A|108
7NWG|1|51|G|109
*
7NWG|1|51|C|332
7NWG|1|51|U|333
7NWG|1|51|A|334
7NWG|1|51|A|335
7NWG|1|51|A|336
7NWG|1|51|U|337
7NWG|1|51|A|338
7NWG|1|51|C|339
*
7NWG|1|81|G|33
7NWG|1|81|U|34
7NWG|1|81|C|35
7NWG|1|81|G|36
7NWG|1|81|A|37
7NWG|1|81|U|38
7NWG|1|81|G|39
7NWG|1|81|A|40
7NWG|1|81|A|41
7NWG|1|81|G|42
*
7NWG|1|81|C|101
7NWG|1|81|G|102
7NWG|1|81|A|103
7NWG|1|81|A|104
7NWG|1|81|C|105
7NWG|1|81|G|106
*
7NWG|1|81|C|113
7NWG|1|81|G|114
*
7NWG|1|81|U|136
7NWG|1|81|A|137
7NWG|1|81|C|138
Current chains
- Chain 51
- 28S Ribosomal RNA
- Chain 81
- 5.8S Ribosomal RNA
Nearby chains
- Chain L3
- L13
- Chain N3
- Ribosomal protein L15
- Chain X3
- uL23
- Chain h3
- uL29
- Chain i3
- 60S ribosomal protein L36
- Chain j3
- Ribosomal protein L37
- Chain l3
- eL39
Coloring options: