Motif HL_02129.1 Version HL_02129.1 of this group appears in releases 3.87 to 3.87
#S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | HL_4R4V_002 | 4R4V | 0.2342 | 4 | A | VS ribozyme RNA | G | 670 | A | 673 | C | 676 | cWW | |
2 | HL_8C3A_077 | 8C3A | 0.0865 | 3 | 4 | 5.8S rRNA | G | 124 | A | 126 | C | 129 | cWW | |
3 | HL_5TBW_076 | 5TBW | 0.0000 | 3 | 4 | 5.8S rRNA | G | 124 | A | 126 | C | 129 | cWW | |
4 | HL_8VTW_051 | 8VTW | 0.5209 | 3 | 1A | LSU rRNA | C | 2205 | A | 2208 | G | 2219 | cWW | |
5 | HL_6LT7_001 | 6LT7 | 0.9450 | 1 | C | 50-mer RNA | C | 42 | U | 45 | G | 46 | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
GUAUUC | 2 |
GAAACAC | 1 |
CGGAUG | 1 |
CUUG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
UAUU | 2 |
AAACA | 1 |
GGAU | 1 |
UU | 1 |
Release history
Release | 3.87 |
---|---|
Date | 2024-08-14 |
Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.Coloring options: