Motif HL_02129.1 Version HL_02129.1 of this group appears in releases 3.87 to 3.87
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4R4V_002 | 4R4V | 0.2342 | 4 | A | VS ribozyme RNA | G | 670 | A | 673 | C | 676 | cWW |
| 2 | HL_8C3A_077 | 8C3A | 0.0865 | 3 | 4 | 5.8S rRNA | G | 124 | A | 126 | C | 129 | cWW |
| 3 | HL_5TBW_076 | 5TBW | 0.0000 | 3 | 4 | 5.8S rRNA | G | 124 | A | 126 | C | 129 | cWW |
| 4 | HL_8VTW_051 | 8VTW | 0.5209 | 3 | 1A | LSU rRNA | C | 2205 | A | 2208 | G | 2219 | cWW |
| 5 | HL_6LT7_001 | 6LT7 | 0.9450 | 1 | C | 50-mer RNA | C | 42 | U | 45 | G | 46 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUAUUC | 2 |
| GAAACAC | 1 |
| CGGAUG | 1 |
| CUUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAUU | 2 |
| AAACA | 1 |
| GGAU | 1 |
| UU | 1 |
Release history
| Release | 3.87 |
|---|---|
| Date | 2024-08-14 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: